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Cofit
Protein
Homologs
Top cofit genes for HER17_RS18435 from
Pectobacterium carotovorum WPP14
phage late control D family protein
SEED: Gene D protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HER17
_RS12630
hypothetical protein
no
0.62
2
HER17
_RS20550
fatty acid oxidation complex subunit alpha FadB
no
0.62
3
HER17
_RS16645
alpha/beta fold hydrolase
no
0.62
4
HER17
_RS05700
aldo/keto reductase
no
0.62
5
HER17
_RS06555
ABC transporter ATP-binding protein
no
0.60
6
HER17
_RS17165
sulfate transporter CysZ
no
0.59
7
HER17
_RS09275
glycine zipper 2TM domain-containing protein
no
0.58
8
HER17
_RS11340
DUF986 family protein
no
0.57
9
HER17
_RS04540
transporter substrate-binding domain-containing protein
no
0.57
10
HER17
_RS04075
MFS transporter
no
0.57
11
HER17
_RS11985
ABC transporter ATP-binding protein
no
0.56
12
HER17
_RS16810
polysaccharide biosynthesis tyrosine autokinase
no
0.56
13
HER17
_RS16980
cytosine permease
no
0.56
14
HER17
_RS04895
type VI secretion system-associated protein TagO
no
0.56
15
HER17
_RS17350
amino acid ABC transporter permease
no
0.56
16
HER17
_RS13265
hypothetical protein
no
0.56
17
HER17
_RS11655
peptidase T
no
0.55
18
HER17
_RS17785
kdo(2)-lipid IV(A) palmitoleoyltransferase
no
0.55
19
HER17
_RS17645
rhamnogalacturonate lyase
no
0.54
20
HER17
_RS06330
NupC/NupG family nucleoside CNT transporter
no
0.54
Or look for
negative cofitness