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Cofit
Protein
Homologs
Top cofit genes for HER17_RS13190 from
Pectobacterium carotovorum WPP14
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HER17
_RS04340
protein-L-isoaspartate(D-aspartate) O-methyltransferase
no
0.70
2
HER17
_RS20375
Rsd/AlgQ family anti-sigma factor
no
0.64
3
HER17
_RS15290
transcription antiterminator/RNA stability regulator CspE
no
0.62
4
HER17
_RS08945
cysteine desulfuration protein SufE
no
0.61
5
HER17
_RS03285
pyruvate dehydrogenase complex transcriptional repressor PdhR
no
0.61
6
HER17
_RS11355
transcription antiterminator/RNA stability regulator CspE
no
0.61
7
HER17
_RS20065
ribosome hibernation promoting factor
no
0.60
8
HER17
_RS04350
RNA polymerase sigma factor RpoS
no
0.60
9
HER17
_RS05445
endonuclease/exonuclease/phosphatase family protein
no
0.60
10
HER17
_RS16930
molecular chaperone
no
0.58
11
HER17
_RS01945
ABC transporter ATP-binding protein
0.40
0.58
12
HER17
_RS08940
cysteine desulfurase SufS
no
0.58
13
HER17
_RS00235
dipeptide ABC transporter ATP-binding protein
no
0.57
14
HER17
_RS12790
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
no
0.56
15
HER17
_RS08935
Fe-S cluster assembly protein SufD
no
0.56
16
HER17
_RS19865
penicillin-binding protein activator
no
0.56
17
HER17
_RS08665
aminodeoxychorismate lyase
no
0.56
18
HER17
_RS11290
ATP-dependent DNA helicase
no
0.56
19
HER17
_RS20075
RNase adapter RapZ
no
0.56
20
HER17
_RS00225
dipeptide ABC transporter permease DppB
no
0.55
Or look for
negative cofitness