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Cofit
Protein
Homologs
Top cofit genes for HER17_RS11445 from
Pectobacterium carotovorum WPP14
alpha/beta hydrolase
SEED: Xylanase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HER17
_RS08390
betaine-aldehyde dehydrogenase
no
0.70
2
HER17
_RS16525
exodeoxyribonuclease V subunit beta
no
0.69
3
HER17
_RS12550
ABC transporter permease
no
0.68
4
HER17
_RS01025
sugar ABC transporter ATP-binding protein
no
0.67
5
HER17
_RS05035
hypothetical protein
no
0.66
6
HER17
_RS09510
cellulase family glycosylhydrolase
no
0.65
7
HER17
_RS00090
ABC transporter substrate-binding protein
0.28
0.65
8
HER17
_RS13905
PqiC family protein
no
0.65
9
HER17
_RS00045
PTS sugar transporter subunit IIB
no
0.64
10
HER17
_RS19785
ketose-bisphosphate aldolase
no
0.64
11
HER17
_RS03355
DUF3060 domain-containing protein
no
0.64
12
HER17
_RS08030
LuxR C-terminal-related transcriptional regulator
no
0.64
13
HER17
_RS08070
methyl-accepting chemotaxis protein
no
0.63
14
HER17
_RS19990
outer membrane-stress sensor serine endopeptidase DegS
no
0.63
15
HER17
_RS20790
O-antigen ligase family protein
no
0.63
16
HER17
_RS06575
cupin domain-containing protein
no
0.62
17
HER17
_RS15200
glutamate/aspartate ABC transporter permease GltK
no
0.62
18
HER17
_RS09850
aspartate aminotransferase family protein
no
0.62
19
HER17
_RS08085
flagellar transcriptional regulator FlhC
0.42
0.61
20
HER17
_RS06720
type II secretion system minor pseudopilin GspK
no
0.60
Or look for
negative cofitness