Top cofit genes for HER17_RS09825 from Pectobacterium carotovorum WPP14

helix-turn-helix transcriptional regulator
SEED: YheO-like PAS domain

Rank	Hit	Name	Description	Conserved?	Cofitness
1	HER17_RS13305		ABC transporter substrate-binding protein	no	0.79
2	HER17_RS17580		L,D-transpeptidase family protein	no	0.74
3	HER17_RS17250		TonB-dependent receptor plug domain-containing protein	no	0.72
4	HER17_RS17750		Na+/H+ antiporter	no	0.71
5	HER17_RS16210		hypothetical protein	no	0.71
6	HER17_RS02345		DUF4156 domain-containing protein	no	0.70
7	HER17_RS17905		flavodoxin FldB	no	0.70
8	HER17_RS16445		ABC transporter substrate-binding protein	no	0.70
9	HER17_RS03790		XTP/dITP diphosphatase	no	0.69
10	HER17_RS16700		hypothetical protein	no	0.68
11	HER17_RS02325		DASS family sodium-coupled anion symporter	no	0.68
12	HER17_RS14290		tRNA-Asn	no	0.67
13	HER17_RS12460		arginine ABC transporter permease ArtQ	no	0.67
14	HER17_RS03830		nitric oxide-sensing transcriptional repressor NsrR	no	0.67
15	HER17_RS13345		iron ABC transporter permease	no	0.66
16	HER17_RS07470		MmgE/PrpD family protein	no	0.66
17	HER17_RS11550		glycerophosphodiester phosphodiesterase family protein	no	0.66
18	HER17_RS10095		type III secretion protein HrpN	no	0.65
19	HER17_RS16910		hypothetical protein	no	0.65
20	HER17_RS05200		phage baseplate assembly protein V	no	0.65

Or look for negative cofitness