Top cofit genes for HER17_RS08775 from Pectobacterium carotovorum WPP14

transcription-repair coupling factor
SEED: Transcription-repair coupling factor
KEGG: transcription-repair coupling factor (superfamily II helicase)

Rank Hit Name Description Conserved? Cofitness  
1 HER17_RS16905 TetR/AcrR family transcriptional regulator no 0.67
2 HER17_RS17890 site-specific tyrosine recombinase XerD 0.68 0.59
3 HER17_RS11850 crossover junction endodeoxyribonuclease RuvC 0.40 0.58
4 HER17_RS15195 amino acid ABC transporter permease 0.33 0.57
5 HER17_RS01350 tyrosine recombinase XerC 0.41 0.57
6 HER17_RS00395 diguanylate cyclase no 0.56
7 HER17_RS15440 M48 family metallopeptidase 0.73 0.56
8 HER17_RS05045 recombinase RecA 0.86 0.55
9 HER17_RS03390 LacI family DNA-binding transcriptional regulator no 0.54
10 HER17_RS16345 bifunctional uridylyltransferase/uridylyl-removing protein GlnD 0.42 0.54
11 HER17_RS14900 cytochrome d ubiquinol oxidase subunit II 0.46 0.51
12 HER17_RS11840 Holliday junction branch migration DNA helicase RuvB 0.75 0.51
13 HER17_RS19875 DnaA initiator-associating protein DiaA 0.69 0.51
14 HER17_RS12985 LPS biosynthesis-modulating metalloenzyme YejM 0.32 0.50
15 HER17_RS20535 Trk system potassium transporter TrkH no 0.50
16 HER17_RS15200 glutamate/aspartate ABC transporter permease GltK 0.41 0.48
17 HER17_RS09960 LysR family transcriptional regulator 0.28 0.48
18 HER17_RS08635 phosphate acyltransferase PlsX 0.43 0.48
19 HER17_RS15075 LexA regulated protein no 0.48
20 HER17_RS15795 SmdB family multidrug efflux ABC transporter permease/ATP-binding protein no 0.47

Or look for negative cofitness