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Cofit
Protein
Homologs
Top cofit genes for HER17_RS08030 from
Pectobacterium carotovorum WPP14
LuxR C-terminal-related transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HER17
_RS12550
ABC transporter permease
no
0.78
2
HER17
_RS19990
outer membrane-stress sensor serine endopeptidase DegS
no
0.72
3
HER17
_RS00380
cellulose biosynthesis protein BcsE
no
0.70
4
HER17
_RS13010
hypothetical protein
no
0.70
5
HER17
_RS02740
methyl-accepting chemotaxis protein
no
0.70
6
HER17
_RS08390
betaine-aldehyde dehydrogenase
no
0.68
7
HER17
_RS19785
ketose-bisphosphate aldolase
no
0.68
8
HER17
_RS00370
cellulose synthase operon protein YhjQ
no
0.68
9
HER17
_RS05630
glutathione S-transferase
no
0.67
10
HER17
_RS03310
serine hydrolase
no
0.66
11
HER17
_RS21760
CsgG/HfaB family protein
no
0.65
12
HER17
_RS03470
metal ABC transporter substrate-binding protein
no
0.65
13
HER17
_RS07590
hypothetical protein
no
0.65
14
HER17
_RS15670
bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA
no
0.64
15
HER17
_RS11445
alpha/beta hydrolase
no
0.64
16
HER17
_RS18980
putative Ig domain-containing protein
no
0.64
17
HER17
_RS03355
DUF3060 domain-containing protein
no
0.64
18
HER17
_RS05035
hypothetical protein
no
0.63
19
HER17
_RS16820
outer membrane beta-barrel protein
no
0.63
20
HER17
_RS12210
methyl-accepting chemotaxis protein
no
0.63
Or look for
negative cofitness