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Cofit
Protein
Homologs
Top cofit genes for HER17_RS07305 from
Pectobacterium carotovorum WPP14
nitrate regulatory protein
SEED: Response regulator NasT
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HER17
_RS08720
thiamine kinase
no
0.61
2
HER17
_RS19110
YecA family protein
0.40
0.61
3
HER17
_RS20100
NAD-dependent succinate-semialdehyde dehydrogenase
no
0.59
4
HER17
_RS03635
Lrp/AsnC family transcriptional regulator
0.39
0.59
5
HER17
_RS16375
MarR family winged helix-turn-helix transcriptional regulator
no
0.58
6
HER17
_RS11055
patatin-like phospholipase RssA
no
0.58
7
HER17
_RS00160
glycoside hydrolase family 1 protein
no
0.57
8
HER17
_RS18690
TerC family protein
no
0.56
9
HER17
_RS13400
molybdenum cofactor biosynthesis protein B
0.20
0.54
10
HER17
_RS21135
PTS mannitol transporter subunit IICBA
0.32
0.53
11
HER17
_RS10010
type III secretion system export apparatus subunit SctV
no
0.53
12
HER17
_RS14275
LacI family DNA-binding transcriptional regulator
no
0.53
13
HER17
_RS16030
phosphate ABC transporter substrate-binding protein
no
0.53
14
HER17
_RS00735
DUF6250 domain-containing protein
no
0.53
15
HER17
_RS00310
Hcp family type VI secretion system effector
no
0.52
16
HER17
_RS06295
Vat family streptogramin A O-acetyltransferase
no
0.52
17
HER17
_RS13340
iron ABC transporter permease
no
0.52
18
HER17
_RS07330
nitrite reductase large subunit NirB
0.92
0.51
19
HER17
_RS16865
NAD(P)H-dependent oxidoreductase
no
0.51
20
HER17
_RS21905
type I toxin-antitoxin system SymE family toxin
no
0.51
Or look for
negative cofitness