Top cofit genes for HER17_RS02010 from Pectobacterium carotovorum WPP14

transcriptional regulator
SEED: YheO-like PAS domain

Rank	Hit	Name	Description	Conserved?	Cofitness
1	HER17_RS15800		SmdA family multidrug ABC transporter permease/ATP-binding protein	no	0.64
2	HER17_RS17290		NAD(P)-binding domain-containing protein	no	0.57
3	HER17_RS19485		DUF898 domain-containing protein	no	0.56
4	HER17_RS12730		hypothetical protein	no	0.55
5	HER17_RS17760		hypothetical protein	no	0.53
6	HER17_RS19575		helix-turn-helix domain-containing protein	0.66	0.52
7	HER17_RS05245		phage major capsid protein, P2 family	no	0.52
8	HER17_RS11080		trimeric intracellular cation channel family protein	no	0.52
9	HER17_RS00050		PTS sugar transporter subunit IIC	no	0.51
10	HER17_RS16000		ACP phosphodiesterase	0.32	0.51
11	HER17_RS09900		ABC transporter permease	0.28	0.51
12	HER17_RS17030		GntR family transcriptional regulator	0.32	0.51
13	HER17_RS16135		pectate lyase	no	0.50
14	HER17_RS01675		cysteine synthase family protein	no	0.49
15	HER17_RS17260		GNAT family acetyltransferase	no	0.49
16	HER17_RS10330		LLM class flavin-dependent oxidoreductase	no	0.49
17	HER17_RS17485		ash family protein	no	0.49
18	HER17_RS11245		fumarylacetoacetate hydrolase family protein	no	0.48
19	HER17_RS10125		hypothetical protein	no	0.48
20	HER17_RS00930		sugar ABC transporter permease	no	0.48

Or look for negative cofitness