Top cofit genes for HER17_RS00665 from Pectobacterium carotovorum WPP14

envelope stress response regulator transcription factor CpxR
SEED: Copper-sensing two-component system response regulator CpxR
KEGG: two-component system, OmpR family, response regulator CpxR

Rank	Hit	Name	Description	Conserved?	Cofitness
1	HER17_RS02600		protease modulator HflC	0.66	0.88
2	HER17_RS02990		RNA polymerase-associated protein RapA	0.34	0.88
3	HER17_RS20780		lipopolysaccharide heptosyltransferase RfaC	no	0.88
4	HER17_RS11795		lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	0.32	0.87
5	HER17_RS03455		D-threonate 4-phosphate dehydrogenase	no	0.86
6	HER17_RS16020		branched-chain amino acid transport system II carrier protein	0.30	0.84
7	HER17_RS21680		phosphate ABC transporter permease PstC	no	0.84
8	HER17_RS10575		virulence factor SrfC family protein	0.64	0.84
9	HER17_RS16635		membrane-bound lytic murein transglycosylase MltC	no	0.83
10	HER17_RS02745		energy-dependent translational throttle protein EttA	0.82	0.82
11	HER17_RS20770		ADP-glyceromanno-heptose 6-epimerase	0.57	0.81
12	HER17_RS08660		beta-ketoacyl-ACP synthase II	no	0.80
13	HER17_RS19355		aspartate ammonia-lyase	no	0.79
14	HER17_RS21690		phosphate ABC transporter ATP-binding protein PstB	no	0.78
15	HER17_RS20775		ADP-heptose--LPS heptosyltransferase RfaF	0.56	0.78
16	HER17_RS02595		FtsH protease activity modulator HflK	0.70	0.78
17	HER17_RS00985		glutamate racemase	0.70	0.78
18	HER17_RS19820		ADP-ribose diphosphatase	no	0.77
19	HER17_RS01320		class I adenylate cyclase	0.92	0.77
20	HER17_RS11785		MurR/RpiR family transcriptional regulator	no	0.77

Or look for negative cofitness