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  • Top cofit genes for HEPCGN_22845 from Escherichia coli ECOR38

    yohJ: UPF0299 membrane protein YohJ
    SEED: Antiholin-like protein LrgA
    KEGG: holin-like protein

    Rank Hit Name Description Conserved? Cofitness  
    1 HEPCGN_22600 yejM LPS biosynthesis-modulating metalloenzyme YejM no 0.53
    2 HEPCGN_01465 tolB Tol-Pal system protein TolB no 0.52
    3 HEPCGN_16610 rng ribonuclease G no 0.52
    4 HEPCGN_05670 lpp murein lipoprotein Lpp no 0.51
    5 HEPCGN_17700 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.27 0.51
    6 HEPCGN_25890 tpx thiol peroxidase no 0.50
    7 HEPCGN_16705 sspA stringent starvation protein A no 0.50
    8 HEPCGN_04830 yebW Uncharacterized protein YebW no 0.48
    9 HEPCGN_25090 hypothetical protein no 0.48
    10 HEPCGN_02975 dcd dCTP deaminase no 0.48
    11 HEPCGN_25790 pspA phage shock protein PspA 0.65 0.48
    12 HEPCGN_19695 ecdD Protein EcdD no 0.47
    13 HEPCGN_02350 DNA-binding protein no 0.47
    14 HEPCGN_19375 gcvA glycine cleavage system transcriptional regulator GcvA 0.14 0.47
    15 HEPCGN_01460 tolA cell envelope integrity protein TolA no 0.47
    16 HEPCGN_04210 Ogr/Delta-like zinc finger no 0.47
    17 HEPCGN_15535 ftsE cell division ATP-binding protein FtsE no 0.47
    18 HEPCGN_14220 winged helix family transcriptional regulator no 0.46
    19 HEPCGN_12185 btuB TonB-dependent vitamin B12 receptor BtuB 0.54 0.46
    20 HEPCGN_04605 yecM VOC family protein 0.31 0.46

    Or look for negative cofitness