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Cofit
Protein
Homologs
Top cofit genes for HEPCGN_20585 from
Escherichia coli ECOR38
shoB
:
Small toxic protein ShoB
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HEPCGN
_20700
hcaD
phenylpropionate dioxygenase ferredoxin reductase subunit
no
0.68
2
HEPCGN
_26640
DUF4186 domain-containing protein
0.48
0.68
3
HEPCGN
_19135
ygcU
Uncharacterized FAD-linked oxidoreductase YgcU
no
0.62
4
HEPCGN
_14975
dppC
dipeptide ABC transporter permease DppC
no
0.58
5
HEPCGN
_08530
guaC
GMP reductase
no
0.56
6
HEPCGN
_24060
potD
spermidine/putrescine ABC transporter substrate-binding protein PotD
no
0.53
7
HEPCGN
_17845
yqhA
UPF0114 protein YqhA
no
0.52
8
HEPCGN
_27390
transcriptional regulator
no
0.52
9
HEPCGN
_11495
pdeC
c-di-GMP phosphodiesterase PdeC
no
0.51
10
HEPCGN
_01735
lptB
LPS export ABC transporter ATP-binding protein
no
0.51
11
HEPCGN
_06700
ybaT
Inner membrane transport protein YbaT
no
0.51
12
HEPCGN
_26625
yneE
UPF0187 protein YneE
no
0.50
13
HEPCGN
_22145
menF
isochorismate synthase MenF
no
0.50
14
HEPCGN
_07820
yafP
GNAT family N-acetyltransferase
0.58
0.49
15
HEPCGN
_17240
tdcC
threonine/serine transporter TdcC
no
0.49
16
HEPCGN
_06655
IHP2
no
0.48
17
HEPCGN
_01075
nagE
PTS N-acetyl glucosamine transporter subunit IIABC
no
0.48
18
HEPCGN
_01865
mntR
manganese-binding transcriptional regulator MntR
no
0.47
19
HEPCGN
_26200
tehB
tellurite resistance methyltransferase TehB
no
0.47
20
HEPCGN
_21595
yfdY
Uncharacterized protein YfdY
no
0.46
Or look for
negative cofitness