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  • Top cofit genes for HEPCGN_20565 from Escherichia coli ECOR38

    recO: DNA repair protein RecO
    SEED: DNA recombination and repair protein RecO
    KEGG: DNA repair protein RecO (recombination protein O)

    Rank Hit Name Description Conserved? Cofitness  
    1 HEPCGN_22940 ftsK DNA translocase FtsK 0.38 0.77
    2 HEPCGN_06770 recR recombination mediator RecR 0.96 0.76
    3 HEPCGN_13115 uvrD DNA helicase II 0.82 0.75
    4 HEPCGN_13720 recF DNA replication/repair protein RecF 0.97 0.71
    5 HEPCGN_18870 recJ single-stranded-DNA-specific exonuclease RecJ 0.75 0.71
    6 HEPCGN_19295 recC exodeoxyribonuclease V subunit gamma 0.53 0.67
    7 HEPCGN_03270 sbcB exodeoxyribonuclease I 0.66 0.66
    8 HEPCGN_13060 recQ ATP-dependent DNA helicase RecQ 0.78 0.66
    9 HEPCGN_14365 recG ATP-dependent DNA helicase RecG 0.91 0.65
    10 HEPCGN_20525 rseA anti-sigma-E factor RseA 0.24 0.64
    11 HEPCGN_18860 xerD site-specific tyrosine recombinase XerD 0.63 0.63
    12 HEPCGN_19305 recB exodeoxyribonuclease V subunit beta 0.56 0.63
    13 HEPCGN_19310 recD exodeoxyribonuclease V subunit alpha 0.59 0.61
    14 HEPCGN_25325 SAR-endolysin no 0.61
    15 HEPCGN_13125 xerC tyrosine recombinase XerC 0.62 0.60
    16 HEPCGN_24800 ldcA muramoyltetrapeptide carboxypeptidase 0.65 0.60
    17 HEPCGN_04695 ruvB Holliday junction branch migration DNA helicase RuvB 0.59 0.59
    18 HEPCGN_11980 hupA DNA-binding protein HU-alpha 0.29 0.58
    19 HEPCGN_23890 plsX phosphate acyltransferase PlsX 0.50 0.57
    20 HEPCGN_06010 ydgA Protein YdgA no 0.56

    Or look for negative cofitness