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  • Top cofit genes for HEPCGN_19765 from Escherichia coli ECOR38

    hycB: formate hydrogenlyase subunit HycB
    SEED: Formate hydrogenlyase subunit 2

    Rank Hit Name Description Conserved? Cofitness  
    1 HEPCGN_05600 DUF1870 domain-containing protein no 0.52
    2 HEPCGN_09005 fimbrial family protein no 0.49
    3 HEPCGN_23380 hyaE hydrogenase-1 operon protein HyaE no 0.49
    4 HEPCGN_17440 ygjK alpha-glucosidase no 0.48
    5 HEPCGN_04495 araG arabinose ABC transporter ATP-binding protein AraG no 0.45
    6 HEPCGN_12525 rhaR HTH-type transcriptional activator RhaR no 0.45
    7 HEPCGN_00295 ATPase no 0.44
    8 HEPCGN_21805 ATP-binding protein no 0.44
    9 HEPCGN_03960 dcm DNA-cytosine methyltransferase no 0.42
    10 HEPCGN_15410 fba class II aldolase no 0.42
    11 HEPCGN_11225 proP glycine betaine/L-proline transporter ProP no 0.42
    12 HEPCGN_13910 uhpB signal transduction histidine-protein kinase/phosphatase UhpB 0.21 0.41
    13 HEPCGN_01130 ybfP Uncharacterized lipoprotein YbfP no 0.41
    14 HEPCGN_05640 sufB Fe-S cluster assembly protein SufB no 0.40
    15 HEPCGN_21780 Fimbrial domain-containing protein no 0.40
    16 HEPCGN_25820 ycjN Putative ABC transporter periplasmic-binding protein YcjN no 0.40
    17 HEPCGN_18770 Type I toxin-antitoxin system Ibs family toxin no 0.40
    18 HEPCGN_21165 tkt transketolase 0.68 0.40
    19 HEPCGN_15725 pstS phosphate ABC transporter substrate-binding protein no 0.39
    20 HEPCGN_26700 tfaE Prophage tail fiber assembly -like protein TfaE no 0.39

    Or look for negative cofitness