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  • Top cofit genes for HEPCGN_17480 from Escherichia coli ECOR38

    aer: aerotaxis sensor receptor Aer
    SEED: Aerotaxis sensor receptor protein
    KEGG: aerotaxis receptor

    Rank Hit Name Description Conserved? Cofitness  
    1 HEPCGN_06690 Adhesin for cattle intestine colonization no 0.53
    2 HEPCGN_20755 iscR Fe-S cluster assembly transcriptional regulator IscR no 0.53
    3 HEPCGN_05255 ydjY Uncharacterized protein YdjY no 0.50
    4 HEPCGN_13450 rbsC ribose ABC transporter permease 0.44 0.50
    5 HEPCGN_08445 speE polyamine aminopropyltransferase 0.23 0.49
    6 HEPCGN_03760 lysozyme no 0.47
    7 HEPCGN_26785 Phage small terminase subunit 0.47 0.47
    8 HEPCGN_13145 hypothetical protein no 0.47
    9 HEPCGN_00225 hypothetical protein no 0.46
    10 HEPCGN_10790 IS2 ORF2 no 0.46
    11 HEPCGN_01355 hutG formimidoylglutamase no 0.45
    12 HEPCGN_14895 cspA Major cold shock protein no 0.45
    13 HEPCGN_19260 ptsP phosphoenolpyruvate--protein phosphotransferase no 0.44
    14 HEPCGN_10690 integrase no 0.44
    15 HEPCGN_05240 ynjB ABC transporter substrate-binding protein no 0.44
    16 HEPCGN_26375 narU nitrate/nitrite transporter NarU no 0.44
    17 HEPCGN_04160 yecC L-cystine ABC transporter ATP-binding protein YecC no 0.44
    18 HEPCGN_03525 rfaF Glycosyltransferase family 9 (heptosyltransferase) no 0.43
    19 HEPCGN_22740 nupX Putative nucleoside permease NupX no 0.43
    20 HEPCGN_00855 cspE transcription antiterminator/RNA stability regulator CspE 0.52 0.43

    Or look for negative cofitness