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Cofit
Protein
Homologs
Top cofit genes for HEPCGN_17280 from
Escherichia coli ECOR38
yhaK
:
Pirin-like protein YhaK
SEED: Pirin-like protein YhaK
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HEPCGN
_02705
metG
methionine--tRNA ligase
no
0.73
2
HEPCGN
_08785
polB
DNA polymerase II
no
0.71
3
HEPCGN
_20985
uraA
uracil permease
no
0.70
4
HEPCGN
_21035
hyfH
hydrogenase 4 subunit H
0.39
0.68
5
HEPCGN
_23440
torC
pentaheme c-type cytochrome TorC
no
0.66
6
HEPCGN
_22865
ybjD
Uncharacterized protein YbjD
0.64
0.64
7
HEPCGN
_14915
yiaD
OmpA family lipoprotein
no
0.63
8
HEPCGN
_18720
yggE
oxidative stress defense protein
no
0.62
9
HEPCGN
_18310
TetR/AcrR family transcriptional regulator
no
0.61
10
HEPCGN
_10090
treB
PTS trehalose transporter subunit IIBC
no
0.60
11
HEPCGN
_01340
cytosine permease
no
0.60
12
HEPCGN
_24515
Putative lipoprotein
no
0.59
13
HEPCGN
_14860
ysaB
Uncharacterized protein YsaB
no
0.58
14
HEPCGN
_00060
rrrD
lysozyme RrrD
no
0.58
15
HEPCGN
_05665
ldtE
L,D-transpeptidase LdtE
no
0.58
16
HEPCGN
_19385
rlmM
23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM
0.43
0.58
17
HEPCGN
_09590
fimH
type 1 fimbria D-mannose specific adhesin FimH
0.66
0.57
18
HEPCGN
_12515
sodA
superoxide dismutase [Mn]
no
0.56
19
HEPCGN
_13785
cbrA
colicin M resistance protein
no
0.56
20
HEPCGN
_03960
dcm
DNA-cytosine methyltransferase
no
0.56
Or look for
negative cofitness