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Cofit
Protein
Homologs
Top cofit genes for HEPCGN_14285 from
Escherichia coli ECOR38
ShiA-like protein
SEED: ShiA homolog
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HEPCGN
_15860
toxin HigB-2
no
0.66
2
HEPCGN
_17035
mtr
tryptophan permease
no
0.65
3
HEPCGN
_25070
adhE
bifunctional acetaldehyde-CoA/alcohol dehydrogenase
no
0.59
4
HEPCGN
_20320
dgcN
diguanylate cyclase DgcN
no
0.56
5
HEPCGN
_21175
maeB
NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase
no
0.55
6
HEPCGN
_04625
torZ
trimethylamine N-oxide reductase TorZ
no
0.53
7
HEPCGN
_10945
LacI family transcriptional regulator
no
0.52
8
HEPCGN
_03935
hchA
protein deglycase HchA
no
0.51
9
HEPCGN
_24045
cobB
NAD-dependent protein deacylase
no
0.51
10
HEPCGN
_20325
yfiR
Protein YfiR
no
0.50
11
HEPCGN
_19865
gutM
transcriptional regulator GutM
no
0.50
12
HEPCGN
_03565
irp1
yersiniabactin biosynthetic protein Irp1
no
0.50
13
HEPCGN
_17200
garL
2-dehydro-3-deoxyglucarate aldolase
no
0.49
14
HEPCGN
_15870
yhgE
Uncharacterized protein YhgE
no
0.49
15
HEPCGN
_05245
ynjA
Uncharacterized protein YnjA
no
0.49
16
HEPCGN
_11990
nfi
deoxyribonuclease V
no
0.49
17
HEPCGN
_01950
pdeI
putative cyclic di-GMP phosphodiesterase PdeI
no
0.48
18
HEPCGN
_11145
dcuS
Sensor histidine kinase DcuS
no
0.48
19
HEPCGN
_12490
cpxR
envelope stress response regulator transcription factor CpxR
no
0.48
20
HEPCGN
_00660
fes
enterobactin/ferric enterobactin esterase
no
0.47
Or look for
negative cofitness