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Cofit
Protein
Homologs
Top cofit genes for HEPCGN_04420 from
Escherichia coli ECOR38
DNA-binding protein
SEED: putative DNA-binding protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HEPCGN
_21730
mlaA
phospholipid-binding lipoprotein MlaA
0.52
0.81
2
HEPCGN
_19375
gcvA
glycine cleavage system transcriptional regulator GcvA
0.55
0.80
3
HEPCGN
_16865
mlaC
phospholipid-binding protein MlaC
0.67
0.80
4
HEPCGN
_24015
mfd
transcription-repair coupling factor
0.71
0.79
5
HEPCGN
_16850
mlaF
phospholipid ABC transporter ATP-binding protein MlaF
0.68
0.79
6
HEPCGN
_16860
mlaD
outer membrane lipid asymmetry maintenance protein MlaD
0.67
0.78
7
HEPCGN
_26470
ddpB
putative D,D-dipeptide transport system permease protein DdpB
no
0.78
8
HEPCGN
_07745
yagW,ecpD
polymerized tip adhesin of ECP fibers
no
0.77
9
HEPCGN
_16855
mlaE
lipid asymmetry maintenance ABC transporter permease subunit MlaE
no
0.74
10
HEPCGN
_01875
ldtB
L,D-transpeptidase
0.59
0.73
11
HEPCGN
_14710
yiaV
Inner membrane protein YiaV
no
0.73
12
HEPCGN
_13285
wzzE
ECA polysaccharide chain length modulation protein
0.62
0.72
13
HEPCGN
_21110
tmcA
tRNA cytosine(34) acetyltransferase TmcA
no
0.72
14
HEPCGN
_11470
nhaP
Na+/H+ antiporter
0.76
0.72
15
HEPCGN
_16870
mlaC
phospholipid-binding protein MlaC
no
0.72
16
HEPCGN
_05555
ydiQ
electron transfer flavoprotein
no
0.72
17
HEPCGN
_05195
selD
selenide, water dikinase SelD
no
0.71
18
HEPCGN
_24670
minC
septum site-determining protein MinC
no
0.70
19
HEPCGN
_22295
glpC
anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC
no
0.69
20
HEPCGN
_13280
wecB
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
no
0.68
Or look for
negative cofitness