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  • Top cofit genes for HEPCGN_01960 from Escherichia coli ECOR38

    yiaG: transcriptional regulator
    SEED: FIG050068: DNA-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 HEPCGN_23745 solA N-methyl-L-tryptophan oxidase no 0.50
    2 HEPCGN_10305 acyl-CoA hydratase no 0.49
    3 HEPCGN_11030 GTPase no 0.47
    4 HEPCGN_06500 ylbE Uncharacterized protein YlbE no 0.47
    5 HEPCGN_16960 yhbX Putative transferase YhbX no 0.42
    6 HEPCGN_21485 yfeC Uncharacterized protein YfeC no 0.40
    7 HEPCGN_07285 yaiY Inner membrane protein YaiY no 0.39
    8 HEPCGN_14515 rfaY lipopolysaccharide core heptose(II) kinase RfaY no 0.39
    9 HEPCGN_20375 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD no 0.38
    10 HEPCGN_17025 yrbN Uncharacterized protein YrbN no 0.38
    11 HEPCGN_16500 fis DNA-binding transcriptional regulator Fis no 0.38
    12 HEPCGN_13440 rbsK ribokinase no 0.37
    13 HEPCGN_13370 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein no 0.36
    14 HEPCGN_04580 cheZ protein phosphatase CheZ no 0.36
    15 HEPCGN_05860 slyA transcriptional regulator SlyA no 0.36
    16 HEPCGN_19990 ygaH L-valine transporter subunit YgaH no 0.36
    17 HEPCGN_16530 DeoR family transcriptional regulator no 0.36
    18 HEPCGN_11540 alr alanine racemase 0.43 0.36
    19 HEPCGN_25855 pgmB beta-phosphoglucomutase no 0.36
    20 HEPCGN_16675 degQ serine endoprotease DegQ no 0.35

    Or look for negative cofitness