Top cofit genes for GFF993 from Variovorax sp. SCN45

Type IV pilus biogenesis protein PilF
SEED: Type IV pilus biogenesis protein PilF
KEGG: type IV pilus assembly protein PilF

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF5418		Type IV fimbrial biogenesis protein PilY1	no	1.00
2	GFF5417		hypothetical protein	no	0.99
3	GFF2509		Type IV fimbrial assembly protein PilC	0.99	0.99
4	GFF5323		Type IV pilus biogenesis protein PilQ	0.99	0.99
5	GFF5319		Type IV pilus biogenesis protein PilM	0.99	0.99
6	GFF5419		Type IV pilus biogenesis protein PilE	0.99	0.99
7	GFF5416		Type IV fimbrial biogenesis protein PilW	0.94	0.99
8	GFF5321		Type IV pilus biogenesis protein PilO	0.99	0.99
9	GFF5490		Uncharacterized protein with LysM domain, COG1652	0.95	0.99
10	GFF5322		Type IV pilus biogenesis protein PilP	0.99	0.99
11	GFF5320		Type IV pilus biogenesis protein PilN	0.99	0.99
12	GFF5414		hypothetical protein	no	0.99
13	GFF2510		Type IV fimbrial assembly, ATPase PilB	0.99	0.99
14	GFF4432		Two-component system response regulator protein	0.98	0.99
15	GFF2519		FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)	0.95	0.99
16	GFF3068		FIG00538108: hypothetical protein	0.94	0.99
17	GFF3826		Response regulator receiver:LytTr DNA-binding region	0.93	0.99
18	GFF2508		Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-)	0.97	0.98
19	GFF6075		Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB	0.98	0.98
20	GFF5415		Type IV fimbrial biogenesis protein PilV	0.98	0.98

Or look for negative cofitness