Top cofit genes for GFF992 from Variovorax sp. SCN45

23S rRNA (adenine(2503)-C(2))-methyltransferase @ tRNA (adenine(37)-C(2))-methyltransferase (EC 2.1.1.192)
SEED: Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-)
KEGG: ribosomal RNA large subunit methyltransferase N

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF5071		AmpG permease	0.93	0.81
2	GFF4398		Transcriptional regulator, AcrR family	no	0.81
3	GFF1324		Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3)	0.71	0.80
4	GFF4447		2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphat e synthase I alpha (EC 2.5.1.54)	no	0.79
5	GFF1164		2-isopropylmalate synthase (EC 2.3.3.13)	0.33	0.77
6	GFF2006		Isovaleryl-CoA dehydrogenase (EC 1.3.8.4)	0.63	0.77
7	GFF3800		Fumarylacetoacetate hydrolase family protein	0.26	0.77
8	GFF7064		Glutamate--cysteine ligase (EC 6.3.2.2)	0.68	0.76
9	GFF2517		Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase	0.76	0.76
10	GFF5512		N5-carboxyaminoimidazole ribonucleotide mutase (EC 5.4.99.18)	0.50	0.75
11	GFF7379		Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12)	0.62	0.75
12	GFF4803		N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)	no	0.75
13	GFF7377		Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)	no	0.75
14	GFF2141		GTP-binding and nucleic acid-binding protein YchF	0.79	0.74
15	GFF2523		Peptide chain release factor N(5)-glutamine methyltransferase (EC 2.1.1.297)	0.72	0.74
16	GFF3425		no description	no	0.74
17	GFF292		Tol-Pal system beta propeller repeat protein TolB	0.66	0.74
18	GFF2008		Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)	0.62	0.73
19	GFF5509		Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)	0.56	0.73
20	GFF936		Propionyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.3)	0.31	0.73

Or look for negative cofitness