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  • Top cofit genes for GFF99 from Variovorax sp. SCN45

    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6207 Allantoin racemase (EC 5.1.99.3) no 0.64
    2 GFF40 no description no 0.62
    3 GFF4789 FIG01126746: hypothetical protein no 0.62
    4 GFF1896 Two-component transcriptional response regulator, LuxR family no 0.61
    5 GFF5239 hypothetical protein no 0.60
    6 GFF4849 Conjugative transfer protein TrbB no 0.60
    7 GFF4494 hypothetical protein no 0.58
    8 GFF6837 BUG/TctC family periplasmic protein no 0.58
    9 GFF3710 Lactoylglutathione lyase and related lyases no 0.57
    10 GFF122 Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1) no 0.57
    11 GFF3574 hypothetical protein no 0.55
    12 GFF4954 no description no 0.54
    13 GFF3997 Short-chain dehydrogenase/reductase SDR no 0.54
    14 GFF2074 hypothetical protein no 0.53
    15 GFF1783 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO no 0.53
    16 GFF4554 Protease HtpX no 0.52
    17 GFF2723 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit no 0.52
    18 GFF1643 MbtH-like NRPS chaperone no 0.52
    19 GFF2262 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases no 0.52
    20 GFF3602 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.51

    Or look for negative cofitness