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Cofit
Protein
Homologs
Top cofit genes for GFF99 from
Variovorax sp. SCN45
KEGG: RNA polymerase sigma-70 factor, ECF subfamily
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6207
Allantoin racemase (EC 5.1.99.3)
no
0.64
2
GFF40
no description
no
0.62
3
GFF4789
FIG01126746: hypothetical protein
no
0.62
4
GFF1896
Two-component transcriptional response regulator, LuxR family
no
0.61
5
GFF5239
hypothetical protein
no
0.60
6
GFF4849
Conjugative transfer protein TrbB
no
0.60
7
GFF4494
hypothetical protein
no
0.58
8
GFF6837
BUG/TctC family periplasmic protein
no
0.58
9
GFF3710
Lactoylglutathione lyase and related lyases
no
0.57
10
GFF122
Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)
no
0.57
11
GFF3574
hypothetical protein
no
0.55
12
GFF4954
no description
no
0.54
13
GFF3997
Short-chain dehydrogenase/reductase SDR
no
0.54
14
GFF2074
hypothetical protein
no
0.53
15
GFF1783
Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO
no
0.53
16
GFF4554
Protease HtpX
no
0.52
17
GFF2723
Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
no
0.52
18
GFF1643
MbtH-like NRPS chaperone
no
0.52
19
GFF2262
cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
no
0.52
20
GFF3602
Enoyl-CoA hydratase (EC 4.2.1.17)
no
0.51
Or look for
negative cofitness