Top cofit genes for GFF99 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Putative fimbriae
SEED: Putative fimbriae

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF4512		Thiol:disulfide interchange protein DsbG precursor	no	0.59
2	GFF323		Transcriptional regulatory protein zraR	no	0.54
3	GFF4739		PrgI protein	no	0.54
4	GFF245		Protein rarD	no	0.53
5	GFF1728		Putative membrane protein	no	0.51
6	GFF1184		IncF plasmid conjugative transfer surface exclusion protein TraT	no	0.51
7	GFF4105		Protein with similarity to RtcB	no	0.50
8	GFF2152		Putative membrane protein	no	0.50
9	GFF569		Qercetin 2,3-dioxygenase	no	0.49
10	GFF4736		Oxygen-regulated invasion protein OrgA	no	0.48
11	GFF3264		hypothetical protein	no	0.48
12	GFF4864		COG2363	no	0.48
13	GFF2663		Thiol peroxidase, Tpx-type (EC 1.11.1.15)	no	0.47
14	GFF2590		D-alanyl-D-alanine dipeptidase (EC 3.4.13.22)	no	0.47
15	GFF2035		Xanthosine permease	no	0.47
16	GFF4382		Potassium efflux system KefA protein / Small-conductance mechanosensitive channel	no	0.47
17	GFF100		ABC-type multidrug transport system, permease component	no	0.47
18	GFF3819		Autolysis histidine kinase LytS	no	0.47
19	GFF4811		CRISPR-associated protein, Cas5e family	no	0.46
20	GFF4846		tRNA pseudouridine synthase C (EC 4.2.1.70)	no	0.46

Or look for negative cofitness