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  • Top cofit genes for PS417_05005 from Pseudomonas simiae WCS417

    penicillin-binding protein
    SEED: D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)
    KEGG: D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_13285 TonB-dependent receptor no 0.22
    2 PS417_12060 xylitol ABC transporter, permease component (from data) no 0.20
    3 PS417_19945 MarR family transcriptional regulator 0.41 0.19
    4 PS417_14945 beta-lactamase no 0.19
    5 PS417_14355 sugar dehydrogenase no 0.18
    6 PS417_13330 autotransporter no 0.17
    7 PS417_20500 hypothetical protein no 0.17
    8 PS417_08085 diguanylate cyclase 0.62 0.17
    9 PS417_26950 LysR family transcriptional regulator no 0.17
    10 PS417_20955 secretion protein no 0.17
    11 PS417_18970 hypothetical protein 0.77 0.16
    12 PS417_12975 GCN5 family acetyltransferase no 0.16
    13 PS417_17845 3,4-dihydroxyphenylacetate 2,3-dioxygenase no 0.16
    14 PS417_00465 hypothetical protein no 0.16
    15 PS417_03185 NADPH:quinone reductase no 0.16
    16 PS417_11705 cyclic peptide transporter 0.12 0.16
    17 PS417_13015 6-hydroxynicotinate 3-monooxygenase 0.29 0.16
    18 PS417_23435 serine/threonine protein kinase no 0.16
    19 PS417_18195 3-(3-hydroxyphenyl)propionate hydroxylase no 0.16
    20 PS417_01070 methionine ABC transporter substrate-binding protein no 0.15

    Or look for negative cofitness