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  • Top cofit genes for GFF972 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3634 hypothetical protein no 0.56
    2 GFF1565 hypothetical protein no 0.53
    3 GFF4849 Conjugative transfer protein TrbB no 0.53
    4 GFF4844 Conjugative transfer protein TrbL no 0.52
    5 GFF4950 ABC transporter, permease protein (cluster 2, ribose/xylose/arabinose/galactose) no 0.51
    6 GFF4145 transcriptional regulators-like protein no 0.51
    7 GFF5621 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.51
    8 GFF3243 Flavin containing amine oxidoreductase no 0.51
    9 GFF3822 RND efflux system, membrane fusion protein no 0.51
    10 GFF6207 Allantoin racemase (EC 5.1.99.3) no 0.51
    11 GFF1683 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) no 0.50
    12 GFF3433 hypothetical protein no 0.50
    13 GFF782 Alpha-ketoglutarate-dependent dioxygenase AlkB (EC 1.14.11.33) no 0.50
    14 GFF6224 T6SS component TssK (ImpJ/VasE) no 0.50
    15 GFF3686 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) no 0.50
    16 GFF156 Glycosyl transferase, group 2 family no 0.49
    17 GFF2253 no description no 0.49
    18 GFF2157 UPF0301 protein YqgE no 0.49
    19 GFF1401 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.49
    20 GFF4940 FIG033889: YebC paralog in Betaproteobacteria no 0.48

    Or look for negative cofitness