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Cofit
Protein
Homologs
Top cofit genes for GFF971 from
Variovorax sp. SCN45
NLP/P60 protein
SEED: NLP/P60 protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF375
hypothetical protein
no
0.72
2
GFF5429
Iron(III) dicitrate transport protein FecA
no
0.64
3
GFF969
ATP-dependent protease HslVU (ClpYQ), peptidase subunit
no
0.63
4
GFF5856
Outer membrane receptor proteins, likely involved in siderophore uptake
no
0.61
5
GFF5859
KEGG: nickel transport system substrate-binding protein
no
0.60
6
GFF2506
Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-)
no
0.60
7
GFF6532
Phosphoglucomutase (EC 5.4.2.2) @ Phosphomannomutase (EC 5.4.2.8)
no
0.59
8
GFF994
Cytoskeleton protein RodZ
no
0.58
9
GFF3917
Ferrous iron transporter FeoB
no
0.57
10
GFF6659
Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB (RND type)
0.43
0.57
11
GFF248
Cell division protein FtsH (EC 3.4.24.-)
no
0.57
12
GFF1331
Transcriptional regulator, AraC family
no
0.57
13
GFF6173
Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B
no
0.56
14
GFF1313
Cellulose synthase operon protein C
no
0.56
15
GFF531
hypothetical protein
no
0.56
16
GFF3911
Putative phosphoesterase
no
0.55
17
GFF5860
no description
no
0.55
18
GFF3875
beta-N-acetylglucosaminidase (EC 3.2.1.52)
no
0.55
19
GFF2765
FIG00005326: uncharacterized protein
no
0.54
20
GFF3852
Tetrapyrrole methylase family protein
no
0.54
Or look for
negative cofitness