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  • Top cofit genes for GFF971 from Variovorax sp. SCN45

    NLP/P60 protein
    SEED: NLP/P60 protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF375 hypothetical protein no 0.72
    2 GFF5429 Iron(III) dicitrate transport protein FecA no 0.64
    3 GFF969 ATP-dependent protease HslVU (ClpYQ), peptidase subunit no 0.63
    4 GFF5856 Outer membrane receptor proteins, likely involved in siderophore uptake no 0.61
    5 GFF5859 KEGG: nickel transport system substrate-binding protein no 0.60
    6 GFF2506 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) no 0.60
    7 GFF6532 Phosphoglucomutase (EC 5.4.2.2) @ Phosphomannomutase (EC 5.4.2.8) no 0.59
    8 GFF994 Cytoskeleton protein RodZ no 0.58
    9 GFF3917 Ferrous iron transporter FeoB no 0.57
    10 GFF6659 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB (RND type) 0.43 0.57
    11 GFF248 Cell division protein FtsH (EC 3.4.24.-) no 0.57
    12 GFF1331 Transcriptional regulator, AraC family no 0.57
    13 GFF6173 Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B no 0.56
    14 GFF1313 Cellulose synthase operon protein C no 0.56
    15 GFF531 hypothetical protein no 0.56
    16 GFF3911 Putative phosphoesterase no 0.55
    17 GFF5860 no description no 0.55
    18 GFF3875 beta-N-acetylglucosaminidase (EC 3.2.1.52) no 0.55
    19 GFF2765 FIG00005326: uncharacterized protein no 0.54
    20 GFF3852 Tetrapyrrole methylase family protein no 0.54

    Or look for negative cofitness