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  • Top cofit genes for GFF97 from Variovorax sp. SCN45

    Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system
    SEED: Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6268 BUG/TctC family periplasmic protein no 0.57
    2 GFF412 Transcription-repair coupling factor no 0.56
    3 GFF5133 hypothetical protein no 0.54
    4 GFF2153 type IV pili signal transduction protein PilI no 0.52
    5 GFF1096 Phosphate transport system regulatory protein PhoU no 0.52
    6 GFF1612 no description no 0.50
    7 GFF734 no description no 0.50
    8 GFF1627 ABC-type siderophore export system, fused ATPase and permease components no 0.50
    9 GFF3743 Twitching motility protein PilT no 0.50
    10 GFF4439 Probable transmembrane protein no 0.50
    11 GFF2619 Rhs-family protein no 0.48
    12 GFF725 TonB-dependent siderophore receptor no 0.48
    13 GFF109 Protein lysine acetyltransferase Pat (EC 2.3.1.-) no 0.47
    14 GFF5003 FIG00348156: hypothetical protein no 0.47
    15 GFF5917 T6SS component TssB (ImpB/VipA) no 0.46
    16 GFF350 Ferric siderophore transport system, biopolymer transport protein ExbB no 0.46
    17 GFF2184 VWA containing CoxE family protein no 0.46
    18 GFF5097 5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10) no 0.46
    19 GFF2122 Type IV pilus biogenesis protein PilE no 0.46
    20 GFF3147 hypothetical protein no 0.46

    Or look for negative cofitness