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  • Top cofit genes for GFF969 from Variovorax sp. SCN45

    ATP-dependent protease HslVU (ClpYQ), peptidase subunit
    SEED: ATP-dependent protease HslVU (ClpYQ), peptidase subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF375 hypothetical protein 0.52 0.67
    2 GFF6532 Phosphoglucomutase (EC 5.4.2.2) @ Phosphomannomutase (EC 5.4.2.8) no 0.67
    3 GFF5429 Iron(III) dicitrate transport protein FecA no 0.66
    4 GFF5408 Protein serine/threonine phosphatase PrpC, regulation of stationary phase no 0.64
    5 GFF971 NLP/P60 protein no 0.63
    6 GFF5002 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.59
    7 GFF2506 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) no 0.57
    8 GFF1007 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) no 0.57
    9 GFF531 hypothetical protein no 0.57
    10 GFF5347 hypothetical protein no 0.55
    11 GFF3823 FIG00581576: hypothetical protein no 0.55
    12 GFF3917 Ferrous iron transporter FeoB no 0.54
    13 GFF2505 hypothetical protein no 0.54
    14 GFF494 RND efflux system, membrane fusion protein no 0.53
    15 GFF3693 Oxidoreductase no 0.53
    16 GFF3877 Uncharacterized chaperone protein YegD no 0.53
    17 GFF1316 Cellulose synthase catalytic subunit [UDP-forming] (EC 2.4.1.12) no 0.52
    18 GFF5291 Ferrichrome-iron receptor no 0.52
    19 GFF3893 hypothetical protein no 0.52
    20 GFF6034 Replication-associated recombination protein RarA no 0.52

    Or look for negative cofitness