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  • Top cofit genes for GFF957 from Sphingobium sp. HT1-2

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2718 CzcABC family efflux RND transporter, outer membrane protein no 0.85
    2 GFF1145 RNA-binding protein Hfq / RNA-binding protein Hfq no 0.82
    3 GFF2832 Maltodextrin glucosidase (EC 3.2.1.20) no 0.82
    4 GFF1260 hypothetical protein no 0.81
    5 GFF1249 Capsular polysaccharide biosynthesis protein no 0.81
    6 GFF3047 Two-component oxygen-sensor histidine kinase FixL no 0.79
    7 GFF3353 hypothetical protein no 0.79
    8 GFF2283 Quinone oxidoreductase (EC 1.6.5.5) no 0.79
    9 GFF1081 hypothetical protein no 0.79
    10 GFF3760 Ubiquinol-cytochrome C reductase, cytochrome C1 subunit no 0.77
    11 GFF4205 Ubiquinol-cytochrome C chaperone no 0.77
    12 GFF4133 tRNA-5-carboxymethylaminomethyl-2- thiouridine(34) synthesis protein MnmE no 0.77
    13 GFF1150 tRNA-dihydrouridine synthase DusB no 0.77
    14 GFF788 Phytoene desaturase (lycopene-forming) (EC 1.3.99.31) no 0.77
    15 GFF889 Acetoin dehydrogenase E1 component alpha-subunit (EC 2.3.1.190) no 0.75
    16 GFF366 NADH:ubiquinone oxidoreductase 17.2 kD subunit no 0.75
    17 GFF4416 Transcriptional regulator, ArsR family no 0.75
    18 GFF3226 Serine recombinase, PinQ/PinR-type no 0.74
    19 GFF3724 Glucans biosynthesis protein D precursor no 0.74
    20 GFF3090 hypothetical protein no 0.74

    Or look for negative cofitness