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  • Top cofit genes for GFF955 from Variovorax sp. SCN45

    N-acetylmuramoyl-L-alanine amidase, family 2

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF971 NLP/P60 protein no 0.51
    2 GFF6659 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB (RND type) no 0.51
    3 GFF4415 Conjugative transfer protein TrbC no 0.51
    4 GFF3836 Cyclic beta-1,2-glucan synthase (EC 2.4.1.-) no 0.51
    5 GFF6698 ClpXP protease specificity-enhancing factor SspB no 0.50
    6 GFF6708 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.50
    7 GFF1192 no description no 0.49
    8 GFF1360 3-demethylubiquinol 3-O-methyltransferase (EC 2.1.1.64) @ 2-polyprenyl-6-hydroxyphenyl methylase (EC 2.1.1.222) no 0.49
    9 GFF2656 Acyltransferase 3 no 0.49
    10 GFF2103 Regulatory protein, LuxR:Tetratricopeptide TPR_4 no 0.49
    11 GFF3666 Inner membrane protein YbiR, putative anion permease no 0.49
    12 GFF6667 hypothetical protein no 0.48
    13 GFF3917 Ferrous iron transporter FeoB no 0.48
    14 GFF973 PQQ-dependent oxidoreductase, gdhB family no 0.48
    15 GFF4633 no description no 0.48
    16 GFF5859 KEGG: nickel transport system substrate-binding protein no 0.47
    17 GFF3263 Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family no 0.47
    18 GFF4820 BUG/TctC family periplasmic protein no 0.46
    19 GFF7314 no description no 0.46
    20 GFF4694 no description no 0.46

    Or look for negative cofitness