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  • Top cofit genes for PS417_04820 from Pseudomonas simiae WCS417

    poly(beta-D-mannuronate) C5 epimerase
    SEED: Poly(beta-D-mannuronate) C5 epimerase precursor (EC 5.1.3.-)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_17190 MarR family transcriptional regulator no 0.27
    2 PS417_00625 taurine dioxygenase no 0.24
    3 PS417_23065 hypothetical protein no 0.23
    4 PS417_14265 phosphate ABC transporter permease no 0.23
    5 PS417_19630 LuxR family transcriptional regulator no 0.23
    6 PS417_19635 lipid kinase no 0.23
    7 PS417_22205 potassium transporter TrkH no 0.22
    8 PS417_20585 chemotaxis protein no 0.22
    9 PS417_04770 LysR family transcriptional regulator no 0.22
    10 PS417_24860 hypothetical protein no 0.22
    11 PS417_18720 endonuclease no 0.22
    12 PS417_28170 transcriptional regulator 0.31 0.22
    13 PS417_00630 nitrate ABC transporter substrate-binding protein no 0.22
    14 PS417_27345 sn-glycerol-3-phosphate transporter no 0.21
    15 PS417_11730 PvdJ/PvdD/PvdP-like protein 0.40 0.21
    16 PS417_19625 histidine kinase 0.35 0.21
    17 PS417_07095 histidine kinase no 0.21
    18 PS417_03930 thymidine phosphorylase 0.21 0.21
    19 PS417_13605 short-chain dehydrogenase no 0.21
    20 PS417_14555 AsnC family transcriptional regulator no 0.20

    Or look for negative cofitness