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  • Top cofit genes for PS417_04770 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: LysR-family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_22205 potassium transporter TrkH no 0.27
    2 PS417_17625 ornithine monooxygenase no 0.26
    3 PS417_20585 chemotaxis protein no 0.26
    4 PS417_06505 membrane protein no 0.24
    5 PS417_00080 potassium transporter peripheral membrane component no 0.24
    6 PS417_02210 diguanylate cyclase no 0.24
    7 PS417_06080 hypothetical protein no 0.23
    8 PS417_19145 membrane protein no 0.23
    9 PS417_11280 HxcX atypical pseudopilin no 0.23
    10 PS417_18910 acetylornithine deacetylase no 0.22
    11 PS417_06785 NADH:flavin oxidoreductase 0.38 0.22
    12 PS417_04820 poly(beta-D-mannuronate) C5 epimerase no 0.22
    13 PS417_07095 histidine kinase no 0.22
    14 PS417_27165 alkanesulfonate monooxygenase no 0.22
    15 PS417_03800 pilus assembly protein no 0.22
    16 PS417_02165 ZapA 0.28 0.21
    17 PS417_10420 shikimate dehydrogenase no 0.21
    18 PS417_26560 amino acid dehydrogenase 0.38 0.21
    19 PS417_03930 thymidine phosphorylase no 0.21
    20 PS417_26950 LysR family transcriptional regulator no 0.21

    Or look for negative cofitness