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  • Top cofit genes for PS417_04735 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: LysR family transcriptional regulator QseA

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_00710 fusaric acid resistance protein no 0.40
    2 PS417_00720 membrane protein no 0.36
    3 PS417_04750 hypothetical protein 0.62 0.36
    4 PS417_06365 RNA polymerase sigma factor 0.25 0.34
    5 PS417_21040 sulfurylase no 0.34
    6 PS417_22700 RNA polymerase subunit sigma-24 no 0.33
    7 PS417_01355 membrane protein 0.24 0.32
    8 PS417_12610 RNA polymerase sigma factor no 0.32
    9 PS417_25960 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) no 0.31
    10 PS417_21045 cysteine synthase no 0.31
    11 PS417_26255 hypothetical protein no 0.30
    12 PS417_04740 RND transporter 0.62 0.30
    13 PS417_20955 secretion protein no 0.29
    14 PS417_00725 RND transporter no 0.29
    15 PS417_26080 TonB-dependent receptor no 0.29
    16 PS417_00620 GntR family transcriptional regulator no 0.29
    17 PS417_00715 required for octanoate transport, together with NodT, MFP, and FUSC proteins (PS417_00725, PS417_00720, PS417_00710) (from data) no 0.29
    18 PS417_16070 TonB-dependent receptor 0.18 0.29
    19 PS417_05070 serine/threonine protein kinase no 0.28
    20 PS417_15335 hypothetical protein no 0.28

    Or look for negative cofitness