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  • Top cofit genes for PS417_04690 from Pseudomonas simiae WCS417

    transcriptional regulator
    SEED: DNA-binding heavy metal response regulator
    KEGG: two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_17290 RND transporter no 0.69
    2 PS417_17300 RND transporter no 0.65
    3 PS417_17295 RND transporter MFP subunit no 0.60
    4 PS417_11820 histidine kinase 0.40 0.56
    5 PS417_04105 ABC transporter ATP-binding protein 0.60 0.48
    6 PS417_11825 transcriptional regulator 0.53 0.46
    7 PS417_20115 hypothetical protein no 0.37
    8 PS417_27465 cystathionine gamma-synthase no 0.33
    9 PS417_14560 TonB-dependent receptor no 0.32
    10 PS417_08420 lipoprotein no 0.31
    11 PS417_02530 iron ABC transporter substrate-binding protein no 0.31
    12 PS417_02525 iron ABC transporter permease no 0.27
    13 PS417_09225 C4-dicarboxylate ABC transporter no 0.26
    14 PS417_08415 hypothetical protein no 0.25
    15 PS417_12315 peptidylprolyl isomerase 0.29 0.24
    16 PS417_05825 cytochrome D ubiquinol oxidase subunit II 0.47 0.23
    17 PS417_21515 transcriptional regulator 0.31 0.23
    18 PS417_05110 peptidase no 0.22
    19 PS417_17285 hypothetical protein no 0.22
    20 PS417_13250 ABC transporter no 0.22

    Or look for negative cofitness