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  • Top cofit genes for GFF921 from Variovorax sp. SCN45

    Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
    SEED: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
    KEGG: 4-aminobutyrate aminotransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5938 T6SS component TssF (ImpG/VasA) no 0.56
    2 GFF4964 Sulfate permease no 0.56
    3 GFF6677 regulatory protein no 0.54
    4 GFF1635 Polyketide synthase modules and related proteins no 0.54
    5 GFF6086 Putative short-chain dehydrogenase no 0.53
    6 GFF752 hypothetical protein no 0.52
    7 GFF7089 Putative short-chain dehydrogenase no 0.52
    8 GFF5093 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.2.1.60) no 0.51
    9 GFF6637 Putative amidase amiC (EC 3.5.1.4) no 0.50
    10 GFF5489 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake 0.56 0.50
    11 GFF3393 Benzoate ABC transporter, ATP-binding protein 2 no 0.48
    12 GFF680 RecA/RadA recombinase no 0.48
    13 GFF6389 Amidohydrolase domain protein no 0.48
    14 GFF875 no description no 0.48
    15 GFF7272 D-glucarate permease 0.51 0.47
    16 GFF3518 no description no 0.47
    17 GFF3231 hypothetical protein no 0.47
    18 GFF6430 L-carnitine dehydratase/bile acid-inducible protein F no 0.47
    19 GFF5475 Uncharacterized MFS-type transporter no 0.47
    20 GFF5524 Predicted transcriptional regulator no 0.47

    Or look for negative cofitness