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  • Top cofit genes for GFF918 from Variovorax sp. SCN45

    Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)
    SEED: Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)
    KEGG: beta-alanine--pyruvate transaminase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2865 Uncharacterized MFS-type transporter no 0.58
    2 GFF6215 no description no 0.56
    3 GFF5239 hypothetical protein no 0.55
    4 GFF4994 Acyl-CoA-binding protein no 0.55
    5 GFF3659 Two-component transcriptional response regulator, OmpR family no 0.54
    6 GFF4645 GGDEF domain protein no 0.52
    7 GFF3657 Mlr5572 protein no 0.51
    8 GFF6347 AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination no 0.51
    9 GFF7185 no description no 0.50
    10 GFF5981 COGs COG3558 no 0.50
    11 GFF3107 Oxidoreductase, aldo/keto reductase family no 0.50
    12 GFF3647 Cytochrome b no 0.49
    13 GFF379 Ribonuclease HII (EC 3.1.26.4) no 0.49
    14 GFF5011 Geranyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.5) no 0.49
    15 GFF3182 Cyclopropane-fatty-acyl-phospholipid synthase-like protein, clusters with FIG005069 0.66 0.49
    16 GFF6121 FIG003461: hypothetical protein no 0.48
    17 GFF4868 Type IV secretory pathway, VirD2 components (relaxase) no 0.48
    18 GFF6927 Transcriptional regulator, ArsR family no 0.47
    19 GFF4138 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.47
    20 GFF4142 no description no 0.47

    Or look for negative cofitness