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  • Top cofit genes for PS417_04650 from Pseudomonas simiae WCS417

    D-alanine--D-alanine ligase
    SEED: D-alanine--D-alanine ligase (EC 6.3.2.4)
    KEGG: D-alanine-D-alanine ligase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_15085 ATPase AAA no 0.43
    2 PS417_15105 membrane protein 0.56 0.42
    3 PS417_23025 murein transglycosylase 0.28 0.40
    4 PS417_15095 hypothetical protein no 0.40
    5 PS417_15110 protein BatD no 0.40
    6 PS417_11445 enoyl-CoA hydratase no 0.39
    7 PS417_19560 amino acid ABC transporter substrate-binding protein no 0.39
    8 PS417_19145 membrane protein 0.57 0.38
    9 PS417_22190 diguanylate cyclase 0.58 0.38
    10 PS417_15100 BatB protein no 0.37
    11 PS417_28265 pyridoxamine kinase no 0.37
    12 PS417_27520 uroporphyrin-III methyltransferase 0.54 0.37
    13 PS417_16370 chemotaxis protein CheY 0.79 0.36
    14 PS417_10720 chemotaxis protein CheY 0.63 0.36
    15 PS417_23950 polynucleotide phosphorylase/polyadenylase no 0.35
    16 PS417_27665 diguanylate cyclase no 0.35
    17 PS417_06970 LysR family transcriptional regulator no 0.34
    18 PS417_01600 peptidase M23 0.74 0.33
    19 PS417_12920 endoribonuclease no 0.33
    20 PS417_11450 AraC family transcriptional regulator no 0.33

    Or look for negative cofitness