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  • Top cofit genes for GFF911 from Variovorax sp. SCN45

    KEGG: transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2179 hypothetical protein no 0.59
    2 GFF2189 Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) no 0.59
    3 GFF145 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) no 0.59
    4 GFF3145 Two-component system response regulator QseB no 0.57
    5 GFF2702 FAD-dependent oxidoreductase no 0.57
    6 GFF4828 no description no 0.57
    7 GFF6752 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (EC 1.2.1.91) / 2-oxepin-2(3H)-ylideneacetyl-CoA hydrolase (EC 3.3.2.12) no 0.56
    8 GFF1107 NAD(FAD)-utilizing dehydrogenases no 0.56
    9 GFF608 VgrG protein no 0.55
    10 GFF884 BUG/TctC family periplasmic protein no 0.55
    11 GFF2211 Flp pilus assembly protein RcpC/CpaB no 0.55
    12 GFF3450 Transcriptional regulator, LacI family no 0.53
    13 GFF4972 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) no 0.52
    14 GFF199 Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA no 0.52
    15 GFF3671 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.52
    16 GFF792 putative FecR no 0.52
    17 GFF3402 no description no 0.52
    18 GFF6932 no description no 0.52
    19 GFF2107 no description no 0.52
    20 GFF2080 Protein acetyltransferase no 0.51

    Or look for negative cofitness