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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF910 from
Variovorax sp. SCN45
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3847
LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24)
no
0.57
2
GFF1890
3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2)
no
0.56
3
GFF2353
Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)
no
0.54
4
GFF2250
Putative stomatin/prohibitin-family membrane protease subunit aq_911
no
0.53
5
GFF4747
Quinone oxidoreductase (EC 1.6.5.5)
no
0.53
6
GFF532
no description
no
0.53
7
GFF1404
hypothetical protein
no
0.51
8
GFF3367
Septum site-determining protein MinC
no
0.51
9
GFF3905
Aconitate hydratase 2 (EC 4.2.1.3)
no
0.50
10
GFF565
Prepilin-type cleavage/methylation-like protein
no
0.50
11
GFF5729
Methyl-accepting chemotaxis sensor/transducer protein
no
0.50
12
GFF2357
DNA repair protein RecN
no
0.49
13
GFF6575
Conjugative transfer protein TrbJ
no
0.49
14
GFF2046
no description
no
0.48
15
GFF3425
no description
no
0.48
16
GFF5264
Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1)
no
0.48
17
GFF445
Ferrichrome transport ATP-binding protein FhuC
no
0.48
18
GFF7014
Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
no
0.48
19
GFF2498
Glutamate N-acetyltransferase (EC 2.3.1.35) @ N-acetylglutamate synthase (EC 2.3.1.1)
no
0.48
20
GFF1353
Short-chain dehydrogenase/reductase SDR
no
0.48
Or look for
negative cofitness