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Cofit
Protein
Homologs
Top cofit genes for GFF908 from
Variovorax sp. SCN45
Putative oxidoreductase
SEED: Small molecule metabolism
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2316
FIG015547: peptidase, M16 family
0.21
0.60
2
GFF813
Transcriptional regulator PA0877, LysR family
no
0.57
3
GFF6778
possible endonuclease/exonuclease/phosphatase family protein
no
0.53
4
GFF4194
L-carnitine dehydratase/bile acid-inducible protein F
no
0.53
5
GFF5911
Probable L-amino-acid oxidase (EC 1.4.3.2)
no
0.52
6
GFF7212
Nitrilotriacetate monooxygenase [FMNH2]
no
0.51
7
GFF2711
hypothetical protein
no
0.51
8
GFF4958
ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.51
9
GFF1248
FMN reductase (NADPH) (EC 1.5.1.38)
0.17
0.51
10
GFF3770
hypothetical protein
no
0.50
11
GFF637
Two-component system sensor histidine kinase/response regulator hybrid
no
0.50
12
GFF1090
Phosphohistidine phosphatase SixA
no
0.50
13
GFF3226
no description
no
0.50
14
GFF1925
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
0.30
0.50
15
GFF1584
Fumarate hydratase class I, alpha region (EC 4.2.1.2); L(+)-tartrate dehydratase alpha subunit (EC 4.2.1.32)
no
0.49
16
GFF2000
Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17)
no
0.49
17
GFF1860
ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines)
no
0.49
18
GFF2067
OmpA/MotB
no
0.49
19
GFF1256
Probable NADH dehydrogenase/NAD(P)H nitroreductase
no
0.48
20
GFF2559
hypothetical protein
no
0.48
Or look for
negative cofitness