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  • Top cofit genes for PS417_04535 from Pseudomonas simiae WCS417

    lysine transporter LysE
    SEED: L-lysine permease

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_06615 ABC transporter for branched-chain amino acids, substrate-binding component (from data) 0.29 0.25
    2 PS417_04070 porin no 0.22
    3 PS417_19720 DNA-binding protein no 0.21
    4 PS417_19385 GntR family transcriptional regulator 0.45 0.20
    5 PS417_22745 hypothetical protein 0.31 0.20
    6 PS417_04060 dipeptide ABC transporter, permease component (from data) 0.48 0.19
    7 PS417_17015 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) no 0.18
    8 PS417_11725 peptidase M19 no 0.18
    9 PS417_04055 peptide transporter 0.48 0.18
    10 PS417_15395 ATPase no 0.18
    11 PS417_26555 endoribonuclease L-PSP no 0.18
    12 PS417_20180 agmatinase 0.13 0.17
    13 PS417_01450 integrase no 0.17
    14 PS417_03360 histidine kinase no 0.17
    15 PS417_04440 hypoxanthine-guanine phosphoribosyltransferase 0.43 0.17
    16 PS417_04065 peptide ABC transporter substrate-binding protein 0.25 0.17
    17 PS417_27390 ABC transporter permease no 0.17
    18 PS417_15590 hypothetical protein no 0.17
    19 PS417_27705 amino acid dehydrogenase 0.29 0.17
    20 PS417_19135 DeoR faimly transcriptional regulator 0.51 0.16

    Or look for negative cofitness