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  • Top cofit genes for GFF888 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Putative extracytoplasmic tricarboxylate-binding receptor of a tripartite transporter, in cluster with DUF1446

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF706 hypothetical protein no 0.61
    2 GFF6679 hypothetical protein no 0.61
    3 GFF6580 CopG domain-containing protein no 0.60
    4 GFF5161 Glutathione S-transferase (EC 2.5.1.18) no 0.58
    5 GFF1709 no description no 0.58
    6 GFF1341 ABC transporter, ATP-binding protein 2 RSc1754 no 0.58
    7 GFF3173 Transcriptional regulator, IclR family no 0.58
    8 GFF3351 FIG00458971: hypothetical protein no 0.56
    9 GFF4038 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family no 0.56
    10 GFF2603 Tripartite tricarboxylate transporter TctC family no 0.54
    11 GFF3052 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) no 0.53
    12 GFF1524 FIG006045: Sigma factor, ECF subfamily no 0.52
    13 GFF1470 Putative transposase InsK for insertion sequence element IS150 no 0.52
    14 GFF4583 TRAP-type C4-dicarboxylate transport system, large permease component no 0.51
    15 GFF615 beta-glucosidase (EC 3.2.1.21) no 0.50
    16 GFF4615 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase no 0.50
    17 GFF4788 Uncharacterized protein COG3236 no 0.50
    18 GFF5921 T6SS protein serine/threonine phosphatase PppA no 0.50
    19 GFF3394 Benzoate ABC transporter, ATP-binding protein 1 no 0.50
    20 GFF1775 no description no 0.50

    Or look for negative cofitness