Top cofit genes for GFF888 from Hydrogenophaga sp. GW460-11-11-14-LB1

MmgE/PrpD family protein
SEED: MmgE/PrpD family protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF3863		TRAP-type C4-dicarboxylate transport system, small permease component	no	0.39
2	GFF5180		Pirin	0.14	0.37
3	GFF1446		Flagellin protein FlaA	no	0.36
4	GFF125		Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)	no	0.34
5	GFF2558		hypothetical protein	no	0.34
6	GFF3593		Autolysin sensor kinase (EC 2.7.3.-)	no	0.34
7	GFF1216		Quinolinate synthetase (EC 2.5.1.72)	no	0.33
8	GFF387		TRAP-type C4-dicarboxylate transport system, large permease component	no	0.33
9	GFF1531		putative exported protein	no	0.33
10	GFF4136		Cytochrome c oxidase subunit CcoO (EC 1.9.3.1)	no	0.32
11	GFF4714		Nitrite-sensitive transcriptional repressor NsrR	no	0.32
12	GFF3148		IncF plasmid conjugative transfer pilus assembly protein TraK	no	0.32
13	GFF5381		Maebl	no	0.32
14	GFF4315		Protein acetyltransferase	no	0.31
15	GFF3738		hypothetical protein	no	0.31
16	GFF3165		hypothetical protein	no	0.31
17	GFF5513		Two-component response regulator CreB	0.28	0.31
18	GFF5608		hypothetical protein	no	0.30
19	GFF5470		Benzoate-CoA ligase (EC 6.2.1.25)	no	0.30
20	GFF470		FIG00441296: hypothetical protein	no	0.30

Or look for negative cofitness