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  • Top cofit genes for GFF887 from Variovorax sp. SCN45

    Small uncharacterized protein Bpro_4170
    SEED: Small uncharacterized protein Bpro_4170

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1849 FIG00347667: hypothetical protein no 0.49
    2 GFF4503 RNA polymerase sigma factor no 0.49
    3 GFF4173 5-methyltetrahydropteroyltriglutamate--homocystei ne methyltransferase (EC 2.1.1.14) no 0.46
    4 GFF2780 Phosphoesterase, PA-phosphatase related no 0.46
    5 GFF6497 Protein of unknown function (DUF1501) no 0.45
    6 GFF2591 Virulence factor mviM no 0.45
    7 GFF693 BUG/TctC family periplasmic protein no 0.45
    8 GFF2946 Regulator of competence-specific genes no 0.44
    9 GFF287 hypothetical protein no 0.44
    10 GFF5346 Putative outer membrane lipoprotein no 0.44
    11 GFF313 FIG027190: Putative transmembrane protein no 0.44
    12 GFF756 no description no 0.44
    13 GFF1867 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.44
    14 GFF875 no description no 0.44
    15 GFF5247 hypothetical protein no 0.43
    16 GFF481 Glycine betaine/L-proline transport system permease protein ProW (TC 3.A.1.12.1) no 0.43
    17 GFF2487 Two-component system sensor histidine kinase/response regulator hybrid no 0.43
    18 GFF190 Ankyrin no 0.43
    19 GFF6434 Inner membrane protein YqiK no 0.43
    20 GFF4528 Permease of the drug/metabolite transporter (DMT) superfamily no 0.42

    Or look for negative cofitness