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Cofit
Protein
Homologs
Top cofit genes for GFF885 from
Variovorax sp. SCN45
Transcriptional regulator, LysR family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6415
ATP-dependent DNA helicase RecQ
0.29
0.54
2
GFF5637
Molybdenum ABC transporter ATP-binding protein ModC
no
0.52
3
GFF752
hypothetical protein
no
0.51
4
GFF5998
Uncharacterized protein YiiX
no
0.46
5
GFF3486
glutamine synthetase family protein
no
0.45
6
GFF4528
Permease of the drug/metabolite transporter (DMT) superfamily
no
0.45
7
GFF2093
Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase)
no
0.44
8
GFF4707
UDP-glucose 4-epimerase (EC 5.1.3.2)
no
0.44
9
GFF4500
FIG002283: Isochorismatase family protein
no
0.43
10
GFF4272
BUG/TctC family periplasmic protein
no
0.43
11
GFF1643
MbtH-like NRPS chaperone
no
0.43
12
GFF6811
hypothetical protein
no
0.43
13
GFF7193
ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines)
no
0.43
14
GFF3242
FIG00444883: hypothetical protein
no
0.43
15
GFF2290
Chromosome partitioning protein ParA
no
0.42
16
GFF2385
no description
no
0.42
17
GFF6554
Putative ATP/GTP-binding protein
no
0.42
18
GFF1828
phosphodiesterase I
no
0.42
19
GFF6963
Cytochrome c oxidase (cbb3-type) subunit CcoO (EC 1.9.3.1)
no
0.41
20
GFF5735
Flagellar hook-associated protein FlgK
no
0.41
Or look for
negative cofitness