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Cofit
Protein
Homologs
Top cofit genes for GFF882 from
Variovorax sp. SCN45
Outer membrane porin
SEED: Outer membrane protein (porin)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6276
Uncharacterized MFS-type transporter
no
0.59
2
GFF4457
Monofunctional biosynthetic peptidoglycan transglycosylase
no
0.57
3
GFF6845
ATPase involved in DNA repair
no
0.53
4
GFF7369
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
no
0.53
5
GFF6141
2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37)
no
0.51
6
GFF5601
Predicted hydrolase of the alpha/beta-hydrolase fold
no
0.51
7
GFF5525
FIG00933173: hypothetical protein
no
0.50
8
GFF7011
Taurine ABC transporter, permease protein TauC
no
0.50
9
GFF476
InterPro IPR005134 COGs COG2862
no
0.50
10
GFF3795
Flagellar hook-length control protein FliK
no
0.50
11
GFF3647
Cytochrome b
no
0.48
12
GFF1847
Nucleoside ABC transporter, substrate-binding protein
no
0.48
13
GFF1661
no description
no
0.47
14
GFF3575
no description
no
0.47
15
GFF4930
Transcriptional regulator, LysR family
no
0.47
16
GFF2947
3'-5' exonuclease
no
0.47
17
GFF3432
L-carnitine dehydratase/bile acid-inducible protein F
no
0.45
18
GFF6603
Glycosidases
no
0.45
19
GFF3921
Tryptophan 2,3-dioxygenase (EC 1.13.11.11)
no
0.45
20
GFF3469
Glutaminase (EC 3.5.1.2)
no
0.45
Or look for
negative cofitness