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  • Top cofit genes for PS417_00445 from Pseudomonas simiae WCS417

    histidine kinase
    SEED: Sensory box histidine kinase
    KEGG: two-component system, NtrC family, sensor histidine kinase KinB

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_13295 TetR family transcriptional regulator no 0.39
    2 PS417_01710 histidine utilization repressor no 0.38
    3 PS417_04270 ribonuclease G no 0.33
    4 PS417_24290 hypothetical protein no 0.33
    5 PS417_22125 porin no 0.33
    6 PS417_25930 pyrroloquinoline quinone biosynthesis protein PqqC no 0.32
    7 PS417_00305 cytochrome oxidase subunit I no 0.32
    8 PS417_11845 RpiR family transcriptional regulator no 0.32
    9 PS417_14920 CoA-transferase no 0.31
    10 PS417_16005 ATPase 0.71 0.31
    11 PS417_17480 branched-chain amino acid ABC transporter substrate-binding protein no 0.31
    12 PS417_11890 Inositol transport system ATP-binding protein (from data) 0.58 0.30
    13 PS417_25920 pyrroloquinoline quinone biosynthesis protein PqqF 0.40 0.30
    14 PS417_25940 pyrroloquinoline quinone biosynthesis protein PqqE no 0.29
    15 PS417_03310 carbonate dehydratase 0.34 0.29
    16 PS417_16510 Clp protease ClpX 0.72 0.29
    17 PS417_19965 histidine kinase 0.57 0.29
    18 PS417_11870 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) (from data) 0.37 0.29
    19 PS417_17495 multidrug ABC transporter permease no 0.29
    20 PS417_01950 malate dehydrogenase 0.54 0.28

    Or look for negative cofitness