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  • Top cofit genes for GFF88 from Sphingobium sp. HT1-2

    Radical SAM domain protein
    SEED: Radical SAM domain protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3427 Transcriptional regulator, LysR family no 0.75
    2 GFF1197 hypothetical protein no 0.75
    3 GFF651 hypothetical protein no 0.71
    4 GFF1459 hypothetical protein no 0.70
    5 GFF369 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) no 0.70
    6 GFF3599 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) 0.41 0.68
    7 GFF4033 hypothetical protein no 0.67
    8 GFF752 Peptidase, M23/M37 family no 0.67
    9 GFF2425 Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage no 0.66
    10 GFF310 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.65
    11 GFF4737 Efflux ABC transporter, permease protein no 0.65
    12 GFF797 Protein tyrosine phosphatase no 0.65
    13 GFF4457 hypothetical protein no 0.64
    14 GFF2374 P-hydroxybenzoate hydroxylase (EC 1.14.13.2) 0.34 0.64
    15 GFF1405 hypothetical protein no 0.63
    16 GFF553 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-) no 0.63
    17 GFF848 hypothetical protein no 0.62
    18 GFF450 SAM-dependent methyltransferase no 0.62
    19 GFF1499 Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6) no 0.62
    20 GFF1164 hypothetical protein no 0.62

    Or look for negative cofitness