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Cofit
Protein
Homologs
Top cofit genes for GFF878 from
Variovorax sp. SCN45
COGs COG2343
SEED: Uncharacterized protein conserved in bacteria
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3979
3-phenylpropionate dioxygenase alpha subunit (EC 1.14.1.-)
no
0.69
2
GFF5973
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42); Monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
no
0.69
3
GFF1168
Arginyl-tRNA--protein transferase (EC 2.3.2.8)
0.38
0.68
4
GFF1288
Sulfate transport system permease protein CysT
no
0.68
5
GFF3943
Poly(A) polymerase (EC 2.7.7.19)
no
0.67
6
GFF1589
FIG00765372: hypothetical protein
no
0.67
7
GFF829
Aerobic cobaltochelatase CobN subunit (EC 6.6.1.2)
0.66
0.67
8
GFF6325
Glutamate--cysteine ligase (EC 6.3.2.2), divergent, of Alpha- and Beta-proteobacteria type
no
0.67
9
GFF699
ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.67
10
GFF6770
2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21)
no
0.66
11
GFF5984
L-lactate dehydrogenase
no
0.66
12
GFF5538
ATP-dependent DNA helicase RecG (EC 3.6.4.12)
no
0.65
13
GFF2801
Homoserine dehydrogenase (EC 1.1.1.3)
no
0.65
14
GFF1003
HflC protein
0.41
0.65
15
GFF6129
(2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10)
no
0.65
16
GFF945
Excinuclease ABC subunit B
no
0.64
17
GFF1202
Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)
no
0.64
18
GFF439
Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)
no
0.64
19
GFF1204
Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8)
no
0.64
20
GFF3583
AMP nucleosidase (EC 3.2.2.4)
no
0.64
Or look for
negative cofitness