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Cofit
Protein
Homologs
Top cofit genes for PS417_04445 from
Pseudomonas simiae WCS417
cupin
SEED: Tryptophan synthase beta chain like (EC 4.2.1.20)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_20650
hypothetical protein
no
0.29
2
PS417
_08190
membrane protein
no
0.28
3
PS417
_23770
exodeoxyribonuclease V subunit alpha
no
0.27
4
PS417
_20655
group 1 glycosyl transferase
no
0.26
5
PS417
_27800
exodeoxyribonuclease III
no
0.26
6
PS417
_00025
transcriptional regulator
no
0.26
7
PS417
_00040
ATPase
no
0.25
8
PS417
_19200
fumarate hydratase
no
0.25
9
PS417
_19825
ATPase AAA
no
0.25
10
PS417
_08185
glycosyl transferase
0.67
0.25
11
PS417
_20660
hypothetical protein
no
0.25
12
PS417
_00740
membrane protein
no
0.25
13
PS417
_17125
transcriptional regulator
no
0.25
14
PS417
_17240
trigger factor
0.46
0.24
15
PS417
_05705
pyocin R2, holin
0.28
0.24
16
PS417
_08245
CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase
no
0.24
17
PS417
_22210
AraC family transcriptional regulator
no
0.24
18
PS417
_04650
D-alanine--D-alanine ligase
no
0.23
19
PS417
_17150
phosphonoacetaldehyde hydrolase
no
0.23
20
PS417
_20985
porin
no
0.23
Or look for
negative cofitness