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  • Top cofit genes for PS417_04380 from Pseudomonas simiae WCS417

    ABC transporter permease
    SEED: Uncharacterized ABC transporter, permease component YrbE
    KEGG: putative ABC transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_07710 membrane protein 0.97 0.57
    2 PS417_04390 toluene tolerance protein 0.98 0.54
    3 PS417_04385 organic solvent ABC transporter substrate-binding protein 0.99 0.54
    4 PS417_02255 lipopolysaccharide kinase 0.59 0.37
    5 PS417_04375 ABC transporter ATP-binding protein 1.00 0.36
    6 PS417_27865 LysR family transcriptional regulator 0.63 0.31
    7 PS417_27245 aminotransferase DegT 0.72 0.30
    8 PS417_06770 multidrug transporter 0.57 0.30
    9 PS417_23915 pantoate--beta-alanine ligase 0.31 0.29
    10 PS417_06680 nuclease PIN 0.43 0.29
    11 PS417_27810 ribonuclease PH 0.82 0.28
    12 PS417_25625 hypothetical protein 0.34 0.28
    13 PS417_12120 IclR family transcriptional regulator no 0.26
    14 PS417_06775 antibiotic transporter 0.96 0.26
    15 PS417_02975 3-dehydroquinate dehydratase 0.71 0.26
    16 PS417_24440 TetR family transcriptional regulator 0.59 0.26
    17 PS417_08345 chemotaxis protein no 0.25
    18 PS417_02270 carbamoyltransferase 0.47 0.25
    19 PS417_25840 SpoVR family protein 0.38 0.25
    20 PS417_23910 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.78 0.24

    Or look for negative cofitness